graph_tool.dynamics#

This module contains implementations of some often-studied dynamical processes that take place on networks.

Discrete-time dynamics#

DiscreteStateBase

Base state for discrete-time dynamics.

EpidemicStateBase

Base state for epidemic dynamics.

SIState

SI compartmental epidemic model.

SISState

SIS compartmental epidemic model.

SIRState

SIR compartmental epidemic model.

SIRSState

SIRS compartmental epidemic model.

VoterState

Generalized q-state voter model dynamics.

MajorityVoterState

Generalized q-state majority voter model dynamics.

BinaryThresholdState

Generalized binary threshold dynamics.

IsingGlauberState

Glauber dynamics of the Ising model.

CIsingGlauberState

Glauber dynamics of the continuous Ising model.

IsingMetropolisState

Metropolis-Hastings dynamics of the Ising model.

PottsGlauberState

Glauber dynamics of the Potts model.

PottsMetropolisState

Metropolis-Hastings dynamics of the Potts model.

AxelrodState

Axelrod's culture dissemination model.

BooleanState

Boolean network dynamics.

KirmanState

Kirman's "ant colony" model.

NormalState

Multivariate Normal distribution.

LinearNormalState

Linear distrecte-time dynamical system with noise.

Continuous-time dynamics#

ContinuousStateBase

Base state for continuous-time dynamics.

LinearState

Linear dynamical system with noise.

LVState

Generalized Lotka-Volterra model.

KuramotoState

The Kuramoto model.

Belief propagation#

BPBaseState

Base class for belief propagation (BP) states.

GenPottsBPState

Belief-propagtion equations for a genralized Potts model.

IsingBPState

Belief-propagation equations for the Ising model.

NormalBPState

Belief-propagation equations for the multivariate Normal distribution.

Contents#